PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.K2CBN
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family bHLH
Protein Properties Length: 304aa    MW: 34233.6 Da    PI: 9.5381
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.K2CBNgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH39.87.9e-1386137155
                  CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
          HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                  +r++h ++Er+RR+++N+ ++ Lr+l+P +   + ++ + a+i   A++++k+L+
  Araip.K2CBN  86 QRMTHIAVERNRRKQMNHYLSLLRSLMPDS---YVQRGDQASIIGGAINFVKELE 137
                  79****************************...9******************995 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:4.10.280.101.0E-1284141IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000839.79E-1284141No hitNo description
SuperFamilySSF474599.68E-1685149IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088814.83185136IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000104.2E-1086137IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003534.3E-991142IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 304 aa     Download sequence    Send to blast
MALKAVVYPQ SQDPSFGYGV NYNNCYRNWS NSYNNEDQRV ETTYPAEIWN NNNTTCSSPP  60
SVLPSSCRPK RRRAKSRKNK EQIENQRMTH IAVERNRRKQ MNHYLSLLRS LMPDSYVQRG  120
DQASIIGGAI NFVKELEQKL QFLGATYQEG EDGNNKKKKN MAFCEFFTFP QYTRTATATA  180
TTSSSSSNSE KSSSSRTVAA EEELGEVAAD IEVTMVESHA NVKIRSKKKP KQLLKMVSAL  240
HNMRLTILHL NVEDDCKLGS VDDIAAAVYQ LMNTIQQEAP IILASTNFKI QASSLISFIT  300
KFGS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
18697RMTHIAVERNRR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016177314.10.0PREDICTED: transcription factor bHLH96-like
SwissprotQ9C7T47e-66BH096_ARATH; Transcription factor bHLH96
TrEMBLA0A0B2QKE51e-106A0A0B2QKE5_GLYSO; Transcription factor bHLH96
TrEMBLI1NIX11e-106I1NIX1_SOYBN; Uncharacterized protein
STRINGGLYMA20G37550.11e-106(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF71834135
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G22490.15e-58bHLH family protein